CDS

Accession Number TCMCG007C21082
gbkey CDS
Protein Id XP_009135976.1
Location complement(join(16383817..16384473,16384561..16384627,16384741..16384819,16384912..16384953,16385059..16385191,16385567..16385755))
Gene LOC103860129
GeneID 103860129
Organism Brassica rapa

Protein

Length 388aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009137728.3
Definition clumping factor B [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description positive regulation of 3'-UTR-mediated mRNA stabilization
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K12891        [VIEW IN KEGG]
ko:K17261        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000077        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000380        [VIEW IN EMBL-EBI]
GO:0000381        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0001501        [VIEW IN EMBL-EBI]
GO:0001756        [VIEW IN EMBL-EBI]
GO:0001947        [VIEW IN EMBL-EBI]
GO:0002009        [VIEW IN EMBL-EBI]
GO:0003002        [VIEW IN EMBL-EBI]
GO:0003007        [VIEW IN EMBL-EBI]
GO:0003143        [VIEW IN EMBL-EBI]
GO:0003197        [VIEW IN EMBL-EBI]
GO:0003228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006977        [VIEW IN EMBL-EBI]
GO:0006978        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007050        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0007368        [VIEW IN EMBL-EBI]
GO:0007389        [VIEW IN EMBL-EBI]
GO:0007507        [VIEW IN EMBL-EBI]
GO:0007517        [VIEW IN EMBL-EBI]
GO:0007519        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008285        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009799        [VIEW IN EMBL-EBI]
GO:0009855        [VIEW IN EMBL-EBI]
GO:0009887        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009952        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010720        [VIEW IN EMBL-EBI]
GO:0010830        [VIEW IN EMBL-EBI]
GO:0010831        [VIEW IN EMBL-EBI]
GO:0010948        [VIEW IN EMBL-EBI]
GO:0014706        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016202        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0017091        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022603        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030330        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031570        [VIEW IN EMBL-EBI]
GO:0031571        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032956        [VIEW IN EMBL-EBI]
GO:0032970        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035050        [VIEW IN EMBL-EBI]
GO:0035239        [VIEW IN EMBL-EBI]
GO:0035282        [VIEW IN EMBL-EBI]
GO:0035295        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0035925        [VIEW IN EMBL-EBI]
GO:0036002        [VIEW IN EMBL-EBI]
GO:0040012        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042770        [VIEW IN EMBL-EBI]
GO:0042772        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0044087        [VIEW IN EMBL-EBI]
GO:0044089        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044773        [VIEW IN EMBL-EBI]
GO:0044774        [VIEW IN EMBL-EBI]
GO:0044783        [VIEW IN EMBL-EBI]
GO:0044819        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045597        [VIEW IN EMBL-EBI]
GO:0045661        [VIEW IN EMBL-EBI]
GO:0045663        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045844        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048562        [VIEW IN EMBL-EBI]
GO:0048568        [VIEW IN EMBL-EBI]
GO:0048598        [VIEW IN EMBL-EBI]
GO:0048634        [VIEW IN EMBL-EBI]
GO:0048636        [VIEW IN EMBL-EBI]
GO:0048641        [VIEW IN EMBL-EBI]
GO:0048643        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048701        [VIEW IN EMBL-EBI]
GO:0048702        [VIEW IN EMBL-EBI]
GO:0048704        [VIEW IN EMBL-EBI]
GO:0048705        [VIEW IN EMBL-EBI]
GO:0048706        [VIEW IN EMBL-EBI]
GO:0048729        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050779        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051147        [VIEW IN EMBL-EBI]
GO:0051149        [VIEW IN EMBL-EBI]
GO:0051153        [VIEW IN EMBL-EBI]
GO:0051155        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051493        [VIEW IN EMBL-EBI]
GO:0051495        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060284        [VIEW IN EMBL-EBI]
GO:0060297        [VIEW IN EMBL-EBI]
GO:0060298        [VIEW IN EMBL-EBI]
GO:0060429        [VIEW IN EMBL-EBI]
GO:0060485        [VIEW IN EMBL-EBI]
GO:0060537        [VIEW IN EMBL-EBI]
GO:0060538        [VIEW IN EMBL-EBI]
GO:0060562        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0061014        [VIEW IN EMBL-EBI]
GO:0061053        [VIEW IN EMBL-EBI]
GO:0061061        [VIEW IN EMBL-EBI]
GO:0061157        [VIEW IN EMBL-EBI]
GO:0061158        [VIEW IN EMBL-EBI]
GO:0061371        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070935        [VIEW IN EMBL-EBI]
GO:0071156        [VIEW IN EMBL-EBI]
GO:0071158        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072331        [VIEW IN EMBL-EBI]
GO:0072358        [VIEW IN EMBL-EBI]
GO:0072359        [VIEW IN EMBL-EBI]
GO:0072395        [VIEW IN EMBL-EBI]
GO:0072401        [VIEW IN EMBL-EBI]
GO:0072413        [VIEW IN EMBL-EBI]
GO:0072422        [VIEW IN EMBL-EBI]
GO:0072431        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097157        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0110020        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901861        [VIEW IN EMBL-EBI]
GO:1901863        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901988        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901991        [VIEW IN EMBL-EBI]
GO:1902115        [VIEW IN EMBL-EBI]
GO:1902117        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902400        [VIEW IN EMBL-EBI]
GO:1902402        [VIEW IN EMBL-EBI]
GO:1902403        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1902807        [VIEW IN EMBL-EBI]
GO:1902809        [VIEW IN EMBL-EBI]
GO:1902811        [VIEW IN EMBL-EBI]
GO:1902903        [VIEW IN EMBL-EBI]
GO:1902905        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1903313        [VIEW IN EMBL-EBI]
GO:1904888        [VIEW IN EMBL-EBI]
GO:1905868        [VIEW IN EMBL-EBI]
GO:1905870        [VIEW IN EMBL-EBI]
GO:1990715        [VIEW IN EMBL-EBI]
GO:1990825        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000045        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000134        [VIEW IN EMBL-EBI]
GO:2000736        [VIEW IN EMBL-EBI]
GO:2000738        [VIEW IN EMBL-EBI]
GO:2000765        [VIEW IN EMBL-EBI]
GO:2000766        [VIEW IN EMBL-EBI]
GO:2001014        [VIEW IN EMBL-EBI]
GO:2001016        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCAGCCAAACCAGAAAAATAATAATTTTAAAGACACGAAGATCTTCGTTGGAGGTTTAACCTGGAGAACAACAACAGATGATTTAAAAAACTTTTTCCAAGTAAGGTTTGGAGAGGTTATTGATGCTAATGTTGTCAGCGAGGGTCTCCCAGGAGGAAAGTTAAGATCAAAAGGCTATGGCTTTGTTGTTTTTAGGAATGCTGAATCTGCCAATACAGTTTGTCAACTACCGGGGCCGGTTATTGATGGAAGAAAAACCAATGTCAACATGGCTTACATTGGTGCGAAGAATAACACGAACCTGTCTAACCAAAACGGTTTACTAAATCAGGCTGGACCATCGCATCAATATCAAAACGGTTTATTTAATCAGGCGGCATCGCATCAATATCAGCTAGCTTCTCACAATCCAAACCAACATGTTCCTCAGCCCTACTGGGCTCCATATTATGGACATCATCCTTACATGTACAACGTTCCATGCTATTCTTACCCCACCGCCATGGTATCTGTGCAGATGCATCAGTATGTTTTAGCATATAGGATGCAACGGAACTGGGAACGGCTGATTAATCAACCAAGTGTCAAAGTTTCTGCCCCTCCTAATGCACCAATAGTTGAGAACAATGAAGATGAGGCAGATACAGAAACAGACAGTGATCAAGAAGGAGATATCAATGGTGAAGACAATGACATCAATCAAGATGTAAATGATCAAGAGTTAGGAATAAATGAAGAAGATGCAGATACAGAAGCAGACAGTGATCAAGAAGGAGAGATCAGTGCTGGGGAAGACAATGACATCGAGCAAGATGTAAATGATCAAGAGTTAGAGATCAATGAGGAAGATGCAGATGCAGATACAGAAGCAGAAAGTGATGAAGGAGAGATCAGTGCTGGAGAAGACAATGACATCAATCAAGCTGTAAATGATCAAGACTTAGAGATCATGAATGGACAAGAAGATGACACCAAGCAAGAAGTAGATGTAACAAAACAGCTTGCTAATGGAGTTGAGGTTACACTTCAATGTGAGATCGTCTGTGAAGAAGAAGCTGAAAATACACCCCAAGAAAACGGGAATGGTCATGAAGAAAATGGAGAGCAAGAAGAAGGAGAAAAAAAAGAATACATTAAGGAGCGAGTAAGAGAAGCGATATAA
Protein:  
MSQPNQKNNNFKDTKIFVGGLTWRTTTDDLKNFFQVRFGEVIDANVVSEGLPGGKLRSKGYGFVVFRNAESANTVCQLPGPVIDGRKTNVNMAYIGAKNNTNLSNQNGLLNQAGPSHQYQNGLFNQAASHQYQLASHNPNQHVPQPYWAPYYGHHPYMYNVPCYSYPTAMVSVQMHQYVLAYRMQRNWERLINQPSVKVSAPPNAPIVENNEDEADTETDSDQEGDINGEDNDINQDVNDQELGINEEDADTEADSDQEGEISAGEDNDIEQDVNDQELEINEEDADADTEAESDEGEISAGEDNDINQAVNDQDLEIMNGQEDDTKQEVDVTKQLANGVEVTLQCEIVCEEEAENTPQENGNGHEENGEQEEGEKKEYIKERVREAI